Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetyltransferase | DW869_18455 | Not Available | Positive | 4354036 - 4354635 | 23439.9 |
| hypothetical protein | DW869_18465 | Not Available | Negative | 4355368 - 4355559 | 7410.91 |
| sigma-70 family rna polymerase sigma factor | DW869_18470 | Not Available | Positive | 4355585 - 4356145 | 22152.5 |
| hypothetical protein | DW869_18475 | Not Available | Negative | 4356300 - 4356749 | 16616.2 |
| hypothetical protein | DW869_18480 | Not Available | Negative | 4356722 - 4356907 | 6733.26 |
| hypothetical protein | DW869_18485 | Not Available | Positive | 4356917 - 4357201 | 10852.3 |
| dna-binding protein | DW869_18490 | Not Available | Negative | 4357101 - 4357424 | 12499.9 |
| hypothetical protein | DW869_18495 | Not Available | Positive | 4357377 - 4357763 | 13650.4 |
| dna-binding protein | DW869_18500 | Not Available | Negative | 4357755 - 4358066 | 12062.6 |
| duf3408 domain-containing protein | DW869_18505 | Not Available | Positive | 4358627 - 4359121 | 18355.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

