Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_18290 | Not Available | Negative | 4321606 - 4321833 | 8722.8 |
| transporter | DW869_18295 | Not Available | Negative | 4322016 - 4322972 | 35439.4 |
| n-acetylmuramoyl-l-alanine amidase | DW869_18300 | Not Available | Positive | 4323129 - 4324358 | 46293.8 |
| mce family protein | DW869_18305 | Not Available | Positive | 4324378 - 4325265 | 32671.6 |
| chromosomal replication initiator protein dnaa | DW869_18310 | Not Available | Positive | 4325603 - 4327009 | 53559.4 |
| nadph-dependent oxidoreductase | DW869_18315 | Not Available | Negative | 4327094 - 4327834 | 28440.1 |
| hypothetical protein | DW869_18320 | Not Available | Positive | 4327899 - 4328117 | 8589.67 |
| adenosylcobalamin-dependent ribonucleoside-diphosphate reductase | DW869_18325 | Not Available | Positive | 4328178 - 4330724 | 96377.3 |
| hypothetical protein | DW869_18330 | Not Available | Negative | 4330817 - 4333789 | 110688.0 |
| dihydroneopterin aldolase | DW869_18335 | Not Available | Positive | 4333951 - 4334319 | 13945.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

