Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arsr family transcriptional regulator | DW869_18240 | Not Available | Positive | 4313268 - 4313594 | 12236.9 |
| thioredoxin family protein | DW869_18245 | Not Available | Positive | 4313672 - 4313905 | 8315.35 |
| thioredoxin | DW869_18250 | Not Available | Positive | 4313916 - 4314359 | 16803.2 |
| sulfite exporter taue/safe family protein | DW869_18255 | Not Available | Positive | 4314361 - 4315068 | 25781.8 |
| arsenical resistance operon transcriptional repressor arsd | DW869_18260 | Not Available | Positive | 4315104 - 4315430 | 12047.8 |
| arsenical pump-driving atpase | DW869_18265 | Not Available | Positive | 4315459 - 4317171 | 62945.6 |
| arsenate reductase arsc | DW869_18270 | Not Available | Positive | 4317176 - 4317604 | 15960.2 |
| arsenical-resistance protein | DW869_18275 | Not Available | Positive | 4317617 - 4318663 | 38412.8 |
| tonb-dependent receptor | DW869_18280 | Not Available | Negative | 4318912 - 4321089 | 81758.6 |
| hypothetical protein | DW869_18285 | Not Available | Negative | 4321216 - 4321560 | 12868.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

