Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_01675 | Not Available | Negative | 424913 - 425674 | 30020.0 |
| metallophosphoesterase | DW869_01680 | Not Available | Negative | 425640 - 426446 | 31258.2 |
| duf1573 domain-containing protein | DW869_01685 | Not Available | Negative | 426655 - 427068 | 14899.0 |
| diacylglycerol kinase family protein | DW869_01690 | Not Available | Negative | 427163 - 427516 | 12967.2 |
| bifunctional (p)ppgpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase | DW869_01695 | Not Available | Negative | 427538 - 429751 | 84511.3 |
| duf4301 family protein | DW869_01700 | Not Available | Positive | 429895 - 431412 | 56797.3 |
| n-glycanase | DW869_01705 | Not Available | Positive | 431532 - 432782 | 46696.9 |
| dna alkylation repair protein | DW869_01710 | Not Available | Negative | 432887 - 433603 | 28303.2 |
| gnat family n-acetyltransferase | DW869_01715 | Not Available | Negative | 433624 - 434121 | 19247.4 |
| padr family transcriptional regulator | DW869_01720 | Not Available | Positive | 434298 - 434624 | 12456.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

