Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_18085 | Not Available | Negative | 4276940 - 4278340 | 52376.5 |
| dna-binding protein | DW869_18090 | Not Available | Negative | 4278715 - 4279338 | 23853.8 |
| helicase | DW869_18100 | Not Available | Positive | 4279744 - 4281834 | 81474.2 |
| thioredoxin | DW869_18105 | Not Available | Positive | 4282065 - 4282325 | 10400.5 |
| 50s ribosomal protein l11 methyltransferase | DW869_18110 | Not Available | Positive | 4282336 - 4283181 | 31658.8 |
| yccf domain-containing protein | DW869_18115 | Not Available | Negative | 4283403 - 4283771 | 13206.2 |
| glycoside hydrolase family 25 protein | DW869_18120 | Not Available | Negative | 4283817 - 4284683 | 33910.9 |
| diphosphate--fructose-6-phosphate 1-phosphotransferase | DW869_18125 | Not Available | Negative | 4284809 - 4286452 | 59907.0 |
| hypothetical protein | DW869_18130 | Not Available | Positive | 4286603 - 4286851 | 9206.38 |
| acyltransferase | DW869_18135 | Not Available | Positive | 4286862 - 4287419 | 21364.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

