Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_18020 | Not Available | Negative | 4265114 - 4266364 | 48433.9 |
| hypothetical protein | DW869_18025 | Not Available | Negative | 4266361 - 4267593 | 48150.5 |
| hypothetical protein | DW869_18030 | Not Available | Negative | 4267711 - 4268634 | 35769.1 |
| chat domain-containing protein | DW869_18035 | Not Available | Negative | 4269196 - 4270002 | 30418.9 |
| hypothetical protein | DW869_18040 | Not Available | Negative | 4269975 - 4271102 | 43662.9 |
| hypothetical protein | DW869_18045 | Not Available | Negative | 4271109 - 4271411 | 11733.5 |
| hypothetical protein | DW869_18065 | Not Available | Positive | 4273603 - 4274352 | 29068.0 |
| atp-binding protein | DW869_18070 | Not Available | Positive | 4274364 - 4275152 | 29647.9 |
| integrase | DW869_18075 | Not Available | Negative | 4275130 - 4275265 | 5079.25 |
| hypothetical protein | DW869_18080 | Not Available | Negative | 4275325 - 4276896 | 58572.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

