Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| site-specific integrase | DW869_17960 | Not Available | Positive | 4254305 - 4255411 | 42745.0 |
| helicase | DW869_17965 | Not Available | Negative | 4255846 - 4257948 | 80738.9 |
| duf1837 domain-containing protein | DW869_17970 | Not Available | Negative | 4257941 - 4258882 | 36569.9 |
| glutaredoxin-related protein | DW869_17980 | Not Available | Positive | 4259996 - 4260295 | 10877.9 |
| alpha/beta hydrolase | DW869_17985 | Not Available | Positive | 4260298 - 4260888 | 22255.5 |
| hypothetical protein | DW869_17990 | Not Available | Positive | 4261145 - 4261828 | 26176.0 |
| dna-binding protein | DW869_17995 | Not Available | Positive | 4261895 - 4262269 | 14421.7 |
| hypothetical protein | DW869_18000 | Not Available | Negative | 4262407 - 4262604 | 7831.7 |
| is66 family insertion sequence hypothetical protein | DW869_18005 | Not Available | Positive | 4262603 - 4262941 | 12670.1 |
| is66 family insertion sequence hypothetical protein | DW869_18010 | Not Available | Positive | 4262946 - 4263293 | 13470.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

