Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_17905 | Not Available | Negative | 4240248 - 4243370 | 119526.0 |
| llaji family restriction endonuclease | DW869_17910 | Not Available | Negative | 4243375 - 4245618 | 87196.9 |
| hypothetical protein | DW869_17915 | Not Available | Negative | 4245633 - 4246640 | 38256.3 |
| dna cytosine methyltransferase | DW869_17925 | Not Available | Negative | 4247446 - 4248513 | 40721.1 |
| dna cytosine methyltransferase | DW869_17930 | Not Available | Negative | 4248510 - 4249655 | 44719.5 |
| xre family transcriptional regulator | DW869_17935 | Not Available | Negative | 4249652 - 4249876 | 8630.51 |
| hypothetical protein | DW869_17940 | Not Available | Negative | 4250100 - 4250702 | 24022.7 |
| type ii toxin-antitoxin system hipa family toxin | DW869_17945 | Not Available | Negative | 4250738 - 4252009 | 48386.2 |
| xre family transcriptional regulator | DW869_17950 | Not Available | Negative | 4252012 - 4252332 | 11919.9 |
| dna-binding protein | DW869_17955 | Not Available | Positive | 4253294 - 4254205 | 35916.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

