Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| susd/ragb family nutrient-binding outer membrane lipoprotein | DW869_17845 | Not Available | Negative | 4227092 - 4228576 | 55584.1 |
| susc/raga family tonb-linked outer membrane protein | DW869_17850 | Not Available | Negative | 4228591 - 4231737 | 115904.0 |
| hypothetical protein | DW869_17855 | Not Available | Negative | 4231776 - 4232465 | 26567.2 |
| lactaldehyde reductase | DW869_17860 | Not Available | Negative | 4232499 - 4233653 | 40917.7 |
| helicase | DW869_17865 | Not Available | Negative | 4233867 - 4235123 | 48877.9 |
| hypothetical protein | DW869_17870 | Not Available | Positive | 4235213 - 4235398 | 7076.63 |
| dna-binding protein | DW869_17880 | Not Available | Positive | 4236086 - 4236463 | 14595.5 |
| mobilization protein | DW869_17885 | Not Available | Positive | 4236466 - 4237539 | 40794.9 |
| cell filamentation protein fic | DW869_17895 | Not Available | Negative | 4238680 - 4239702 | 39330.8 |
| dna mismatch endonuclease vsr | DW869_17900 | Not Available | Negative | 4239729 - 4240238 | 20524.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

