Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gnat family n-acetyltransferase | DW869_17645 | Not Available | Negative | 4176570 - 4177550 | 37508.3 |
| glycerol acyltransferase | DW869_17650 | Not Available | Negative | 4177574 - 4178392 | 30976.8 |
| hypothetical protein | DW869_17655 | Not Available | Positive | 4178498 - 4178725 | 8935.16 |
| transcriptional regulator mraz | DW869_17660 | Not Available | Positive | 4178760 - 4179224 | 18115.8 |
| 16s rrna (cytosine(1402)-n(4))-methyltransferase rsmh | DW869_17665 | Not Available | Positive | 4179221 - 4180135 | 34333.2 |
| hypothetical protein | DW869_17670 | Not Available | Positive | 4180140 - 4180514 | 14479.4 |
| pasta domain-containing protein | DW869_17675 | Not Available | Positive | 4180519 - 4182699 | 80368.7 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | DW869_17680 | Not Available | Positive | 4182718 - 4184172 | 53314.3 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | DW869_17685 | Not Available | Positive | 4184185 - 4185453 | 47029.8 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | DW869_17690 | Not Available | Positive | 4185468 - 4186802 | 49957.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

