Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 5-(carboxyamino)imidazole ribonucleotide mutase | DW869_17590 | Not Available | Positive | 4165958 - 4166467 | 17745.0 |
| 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase (flavodoxin) | DW869_17595 | Not Available | Positive | 4166551 - 4168395 | 68190.6 |
| glutaminase | DW869_17600 | Not Available | Positive | 4168409 - 4169323 | 34120.9 |
| rna-binding protein | DW869_17605 | Not Available | Negative | 4169638 - 4170009 | 13160.2 |
| hypothetical protein | DW869_17610 | Not Available | Positive | 4170130 - 4170339 | 8019.02 |
| peptidase m23 | DW869_17620 | Not Available | Negative | 4170511 - 4171845 | 50695.0 |
| duf4292 domain-containing protein | DW869_17625 | Not Available | Negative | 4171845 - 4172678 | 31437.2 |
| tetratricopeptide repeat protein | DW869_17630 | Not Available | Negative | 4172675 - 4174483 | 69691.2 |
| dutp diphosphatase | DW869_17635 | Not Available | Negative | 4174493 - 4174927 | 15780.1 |
| deoxyguanosinetriphosphate triphosphohydrolase | DW869_17640 | Not Available | Positive | 4175150 - 4176481 | 50252.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

