Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_17535 | Not Available | Negative | 4153598 - 4154227 | 24237.5 |
| na+-dependent phosphate transporter | DW869_17545 | Not Available | Negative | 4154918 - 4155292 | 14278.8 |
| na/pi cotransporter family protein | DW869_17550 | Not Available | Negative | 4155484 - 4157175 | 62887.8 |
| nucleoside kinase | DW869_17555 | Not Available | Positive | 4157257 - 4158930 | 64724.8 |
| glycyl radical protein | DW869_17560 | Not Available | Positive | 4159232 - 4161658 | 91964.6 |
| glycyl-radical enzyme activating protein | DW869_17565 | Not Available | Positive | 4161663 - 4162571 | 33564.0 |
| xaa-pro aminopeptidase | DW869_17570 | Not Available | Negative | 4162921 - 4163151 | 8754.29 |
| rna polymerase sigma-54 factor | DW869_17575 | Not Available | Positive | 4163280 - 4164749 | 56144.2 |
| pap2 family protein | DW869_17580 | Not Available | Positive | 4164760 - 4165416 | 24809.8 |
| glycine cleavage system protein h | DW869_17585 | Not Available | Positive | 4165453 - 4165833 | 14151.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

