Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gtra family protein | DW869_17460 | Not Available | Negative | 4140133 - 4140522 | 14958.9 |
| hsp20/alpha crystallin family protein | DW869_17465 | Not Available | Negative | 4140917 - 4141354 | 16949.0 |
| rna methyltransferase | DW869_17475 | Not Available | Positive | 4142766 - 4143572 | 29032.5 |
| dde transposase | DW869_17485 | Not Available | Negative | 4145224 - 4146228 | 38932.0 |
| hypothetical protein | DW869_17505 | Not Available | Negative | 4148534 - 4149106 | 21555.6 |
| luxr family transcriptional regulator | DW869_17510 | Not Available | Negative | 4149253 - 4150533 | 50037.5 |
| hypothetical protein | DW869_17515 | Not Available | Negative | 4150911 - 4151192 | 10998.3 |
| hypothetical protein | DW869_17520 | Not Available | Negative | 4151380 - 4151774 | 15060.7 |
| hypothetical protein | DW869_17525 | Not Available | Negative | 4151892 - 4152647 | 28993.8 |
| hypothetical protein | DW869_17530 | Not Available | Positive | 4152987 - 4153427 | 16935.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

