Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| rna pseudouridine synthase | DW869_17405 | Not Available | Negative | 4133840 - 4135462 | 62189.9 |
| hypothetical protein | DW869_17410 | Not Available | Negative | 4135510 - 4135824 | 12133.7 |
| hypothetical protein | DW869_17415 | Not Available | Positive | 4135805 - 4135996 | 7530.53 |
| hypothetical protein | DW869_17420 | Not Available | Positive | 4136012 - 4136218 | 7792.68 |
| hypothetical protein | DW869_17430 | Not Available | Positive | 4136429 - 4136902 | 18360.6 |
| mgmt family protein | DW869_17435 | Not Available | Negative | 4136852 - 4137205 | 13274.9 |
| nitrous oxide-stimulated promoter family protein | DW869_17440 | Not Available | Negative | 4137211 - 4137504 | 11961.9 |
| maoc family dehydratase | DW869_17445 | Not Available | Positive | 4137602 - 4138066 | 17703.5 |
| gnat family n-acetyltransferase | DW869_17450 | Not Available | Negative | 4138257 - 4139198 | 36081.8 |
| sdr family oxidoreductase | DW869_17455 | Not Available | Negative | 4139241 - 4140116 | 33000.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

