Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arylsulfatase | DW869_17355 | Not Available | Negative | 4116669 - 4118186 | 57793.3 |
| hypothetical protein | DW869_17360 | Not Available | Positive | 4118257 - 4118439 | 6965.73 |
| pyruvate:ferredoxin (flavodoxin) oxidoreductase | DW869_17365 | Not Available | Negative | 4118403 - 4121948 | 129303.0 |
| atp-binding protein | DW869_17370 | Not Available | Negative | 4121991 - 4123169 | 46118.2 |
| hypothetical protein | DW869_17375 | Not Available | Positive | 4123272 - 4124483 | 45786.4 |
| tolc family protein | DW869_17380 | Not Available | Negative | 4124522 - 4125895 | 51778.1 |
| multidrug efflux rnd transporter permease subunit | DW869_17385 | Not Available | Negative | 4125917 - 4129018 | 113097.0 |
| efflux rnd transporter periplasmic adaptor subunit | DW869_17390 | Not Available | Negative | 4129085 - 4130284 | 44405.6 |
| trkh family potassium uptake protein | DW869_17395 | Not Available | Positive | 4130779 - 4132287 | 56375.6 |
| mate family efflux transporter | DW869_17400 | Not Available | Positive | 4132413 - 4133774 | 49516.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

