Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | DW869_17230 | Not Available | Positive | 4092105 - 4092965 | 33567.5 |
| aldo/keto reductase | DW869_17235 | Not Available | Positive | 4093083 - 4094015 | 34858.4 |
| amidohydrolase | DW869_17240 | Not Available | Positive | 4094033 - 4094956 | 35522.1 |
| l-fucose:h+ symporter permease | DW869_17245 | Not Available | Positive | 4094983 - 4096242 | 47261.1 |
| sorbitol dehydrogenase | DW869_17250 | Not Available | Positive | 4096265 - 4097284 | 36707.0 |
| naat family transporter | DW869_17255 | Not Available | Negative | 4097357 - 4098001 | 23868.2 |
| Trna-ala | Not Available | Not Available | Positive | 4101340 - 4101413 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 4101428 - 4101504 | Not Available |
| carboxypeptidase-like regulatory domain-containing protein | DW869_17285 | Not Available | Negative | 4104508 - 4106064 | 60100.6 |
| anti-sigma factor | DW869_17290 | Not Available | Negative | 4106074 - 4106928 | 32355.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

