Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3873 domain-containing protein | DW869_16965 | Not Available | Negative | 4031679 - 4031900 | 8793.49 |
| hypothetical protein | DW869_16970 | Not Available | Negative | 4031913 - 4032200 | 11232.7 |
| pcfj-like protein | DW869_16975 | Not Available | Negative | 4032197 - 4033477 | 49628.1 |
| pcfk-like protein | DW869_16980 | Not Available | Negative | 4033479 - 4033889 | 15854.7 |
| hypothetical protein | DW869_16985 | Not Available | Negative | 4033897 - 4034154 | 9878.49 |
| hypothetical protein | DW869_16990 | Not Available | Negative | 4034173 - 4034391 | 8733.45 |
| hypothetical protein | DW869_16995 | Not Available | Negative | 4034416 - 4034631 | 8285.87 |
| molybdenum abc transporter atp-binding protein | DW869_17000 | Not Available | Negative | 4034628 - 4034975 | 13810.8 |
| hypothetical protein | DW869_17010 | Not Available | Positive | 4035276 - 4035470 | 7104.85 |
| dna-binding response regulator | DW869_17025 | Not Available | Positive | 4036115 - 4036900 | 30262.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

