Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fimbrillin family protein | DW869_16700 | Not Available | Positive | 3960634 - 3961773 | 42246.0 |
| fimbrillin family protein | DW869_16705 | Not Available | Positive | 3961903 - 3962973 | 39483.0 |
| hypothetical protein | DW869_16710 | Not Available | Positive | 3963039 - 3964745 | 63815.7 |
| hypothetical protein | DW869_16715 | Not Available | Positive | 3965050 - 3965149 | 3479.03 |
| hypothetical protein | DW869_16720 | Not Available | Negative | 3965477 - 3966232 | 27628.8 |
| sodium:glutamate symporter | DW869_16725 | Not Available | Positive | 3966655 - 3968034 | 49829.2 |
| duf4375 domain-containing protein | DW869_16730 | Not Available | Negative | 3968204 - 3968713 | 19574.0 |
| hypothetical protein | DW869_16735 | Not Available | Positive | 3968950 - 3969651 | 25285.6 |
| gggtgrt protein | DW869_16740 | Not Available | Positive | 3969670 - 3970680 | 35757.9 |
| site-specific integrase | DW869_16745 | Not Available | Positive | 3971036 - 3972253 | 47052.1 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

