Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| xanthine phosphoribosyltransferase | DW869_16650 | Not Available | Positive | 3949108 - 3949674 | 20888.7 |
| purine permease | DW869_16655 | Not Available | Positive | 3949679 - 3951010 | 46660.3 |
| phosphotransferase | DW869_16660 | Not Available | Positive | 3951113 - 3952543 | 55451.0 |
| nucleotidyltransferase family protein | DW869_16665 | Not Available | Positive | 3952540 - 3953385 | 32216.8 |
| methionine synthase | DW869_16670 | Not Available | Negative | 3953580 - 3956333 | 100862.0 |
| ssra-binding protein | DW869_16675 | Not Available | Negative | 3956371 - 3956823 | 17572.4 |
| duf1282 domain-containing protein | DW869_16680 | Not Available | Negative | 3956823 - 3957392 | 21107.3 |
| recombinase | DW869_16685 | Not Available | Positive | 3957767 - 3958855 | 41866.2 |
| hypothetical protein | DW869_16690 | Not Available | Positive | 3959248 - 3959586 | 13051.2 |
| duf5119 domain-containing protein | DW869_16695 | Not Available | Positive | 3959583 - 3960590 | 37815.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

