Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_16550 | Not Available | Negative | 3927275 - 3927676 | 15525.5 |
| ragb/susd family nutrient uptake outer membrane protein | DW869_16555 | Not Available | Negative | 3928440 - 3929882 | 54946.9 |
| susc/raga family tonb-linked outer membrane protein | DW869_16560 | Not Available | Negative | 3929895 - 3933176 | 123217.0 |
| tlpa family protein disulfide reductase | DW869_16565 | Not Available | Negative | 3933206 - 3934546 | 51236.8 |
| putative dna modification/repair radical sam protein | DW869_16570 | Not Available | Positive | 3934904 - 3936172 | 48564.8 |
| dna metabolism protein | DW869_16575 | Not Available | Positive | 3936169 - 3936936 | 30614.9 |
| trna pseudouridine(38-40) synthase trua | DW869_16580 | Not Available | Negative | 3936902 - 3937705 | 30885.8 |
| hypothetical protein | DW869_16585 | Not Available | Negative | 3937710 - 3938384 | 24792.2 |
| phoh family protein | DW869_16590 | Not Available | Positive | 3938542 - 3939546 | 37699.4 |
| phosphoribosylaminoimidazolesuccinocarboxamide synthase | DW869_16595 | Not Available | Positive | 3939567 - 3940511 | 35931.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

