Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ecf transporter s component | DW869_16145 | Not Available | Negative | 3843821 - 3844330 | 18481.4 |
| hypothetical protein | DW869_16150 | Not Available | Positive | 3844464 - 3844946 | 17559.9 |
| duf4010 domain-containing protein | DW869_16155 | Not Available | Positive | 3845024 - 3846313 | 48246.9 |
| putative sulfate exporter family transporter | DW869_16160 | Not Available | Negative | 3846405 - 3847391 | 35078.0 |
| lysr family transcriptional regulator | DW869_16165 | Not Available | Negative | 3847480 - 3848376 | 34367.8 |
| hypothetical protein | DW869_16170 | Not Available | Negative | 3848389 - 3848970 | 21484.8 |
| atp-dependent chaperone clpb | DW869_16175 | Not Available | Positive | 3849245 - 3851833 | 97163.7 |
| hypothetical protein | DW869_16180 | Not Available | Negative | 3852979 - 3853419 | 16049.2 |
| dephospho-coa kinase | DW869_16185 | Not Available | Negative | 3853486 - 3854082 | 22415.2 |
| ybbr-like domain-containing protein | DW869_16190 | Not Available | Negative | 3854075 - 3855088 | 39038.4 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

