Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| frg domain-containing protein | DW869_16040 | Not Available | Negative | 3818226 - 3819710 | 57633.8 |
| hypothetical protein | DW869_16045 | Not Available | Negative | 3819913 - 3820338 | 16259.6 |
| is1182 family transposase | DW869_16055 | Not Available | Positive | 3821529 - 3822392 | 34060.1 |
| hypothetical protein | DW869_16060 | Not Available | Negative | 3822604 - 3823815 | 45862.6 |
| wg repeat-containing protein | DW869_16065 | Not Available | Negative | 3823834 - 3825681 | 68512.6 |
| hypothetical protein | DW869_16070 | Not Available | Negative | 3825693 - 3826628 | 34541.0 |
| hypothetical protein | DW869_16075 | Not Available | Negative | 3826636 - 3827586 | 35079.1 |
| hypothetical protein | DW869_16080 | Not Available | Negative | 3827599 - 3828084 | 18259.8 |
| hypothetical protein | DW869_16085 | Not Available | Negative | 3828235 - 3828729 | 18048.3 |
| wg repeat-containing protein | DW869_16090 | Not Available | Negative | 3828752 - 3830446 | 63023.1 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

