Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amp-binding protein | DW869_01465 | Not Available | Negative | 365493 - 367145 | 62239.3 |
| xre family transcriptional regulator | DW869_01470 | Not Available | Negative | 367152 - 367727 | 21391.5 |
| riboflavin synthase | DW869_01475 | Not Available | Positive | 367932 - 368534 | 22635.2 |
| yihy/virulence factor brkb family protein | DW869_01480 | Not Available | Negative | 368667 - 369995 | 50578.4 |
| hypothetical protein | DW869_01495 | Not Available | Negative | 370664 - 370951 | 11413.6 |
| j domain-containing protein | DW869_01500 | Not Available | Negative | 370967 - 371938 | 35210.0 |
| sensor histidine kinase | DW869_01505 | Not Available | Positive | 371985 - 373988 | 75584.6 |
| bifunctional metallophosphatase/5'-nucleotidase | DW869_01510 | Not Available | Positive | 374000 - 375742 | 65649.8 |
| hypothetical protein | DW869_01515 | Not Available | Positive | 375747 - 376085 | 12713.8 |
| tonb-dependent receptor | DW869_01520 | Not Available | Positive | 376217 - 378550 | 87165.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

