Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_15985 | Not Available | Negative | 3806607 - 3806807 | 7602.21 |
| hypothetical protein | DW869_15995 | Not Available | Positive | 3807265 - 3807486 | 8196.78 |
| hypothetical protein | DW869_16000 | Not Available | Positive | 3807499 - 3808071 | 22059.7 |
| hypothetical protein | DW869_16005 | Not Available | Negative | 3808211 - 3808564 | 13166.5 |
| hypothetical protein | DW869_16010 | Not Available | Negative | 3808584 - 3809069 | 18453.3 |
| duf4065 domain-containing protein | DW869_16015 | Not Available | Negative | 3809075 - 3809632 | 21054.3 |
| dna methylase | DW869_16020 | Not Available | Positive | 3810172 - 3815151 | 189465.0 |
| ntpase | DW869_16025 | Not Available | Negative | 3815393 - 3817282 | 73038.8 |
| hypothetical protein | DW869_16030 | Not Available | Negative | 3817293 - 3817457 | 5995.43 |
| hypothetical protein | DW869_16035 | Not Available | Negative | 3817505 - 3817894 | 14839.9 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

