Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_15835 | Not Available | Negative | 3783498 - 3783737 | 9288.25 |
| hypothetical protein | DW869_15840 | Not Available | Positive | 3783753 - 3784238 | 18875.2 |
| hypothetical protein | DW869_15845 | Not Available | Positive | 3784670 - 3784864 | 7464.04 |
| hypothetical protein | DW869_15850 | Not Available | Positive | 3784869 - 3785153 | 11212.5 |
| hypothetical protein | DW869_15855 | Not Available | Positive | 3785164 - 3785535 | 13913.6 |
| duf1738 domain-containing protein | DW869_15860 | Not Available | Negative | 3785590 - 3787272 | 64562.3 |
| hypothetical protein | DW869_15865 | Not Available | Negative | 3787278 - 3787889 | 22991.4 |
| hypothetical protein | DW869_15870 | Not Available | Negative | 3787972 - 3788148 | 6671.7 |
| glucosaminidase | DW869_15875 | Not Available | Negative | 3788161 - 3789717 | 57492.7 |
| duf1738 domain-containing protein | DW869_15880 | Not Available | Negative | 3789729 - 3791927 | 84297.8 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

