Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_15775 | Not Available | Positive | 3775020 - 3776069 | 40610.9 |
| hypothetical protein | DW869_15780 | Not Available | Positive | 3776081 - 3776533 | 17525.0 |
| hypothetical protein | DW869_15785 | Not Available | Positive | 3776568 - 3776939 | 14750.0 |
| hypothetical protein | DW869_15790 | Not Available | Positive | 3776936 - 3777493 | 21224.4 |
| marr family transcriptional regulator | DW869_15795 | Not Available | Positive | 3777512 - 3778378 | 32689.1 |
| recombinase | DW869_15800 | Not Available | Positive | 3778585 - 3780042 | 55477.1 |
| hypothetical protein | DW869_15805 | Not Available | Positive | 3780096 - 3781538 | 53827.0 |
| histone h1 | DW869_15810 | Not Available | Negative | 3781668 - 3781841 | 6594.98 |
| hypothetical protein | DW869_15820 | Not Available | Positive | 3782311 - 3782781 | 17614.4 |
| hypothetical protein | DW869_15825 | Not Available | Positive | 3782957 - 3783313 | 14027.1 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

