Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_15715 | Not Available | Positive | 3768474 - 3768782 | 12123.8 |
| single-stranded dna-binding protein | DW869_15720 | Not Available | Positive | 3768779 - 3769159 | 14495.4 |
| hypothetical protein | DW869_15725 | Not Available | Positive | 3769647 - 3770174 | 20436.4 |
| hypothetical protein | DW869_15735 | Not Available | Positive | 3770641 - 3770955 | 12769.8 |
| hypothetical protein | DW869_15740 | Not Available | Positive | 3770997 - 3771287 | 10983.5 |
| duf4313 domain-containing protein | DW869_15745 | Not Available | Positive | 3771374 - 3771874 | 19301.5 |
| hypothetical protein | DW869_15750 | Not Available | Positive | 3772365 - 3772619 | 10115.0 |
| hypothetical protein | DW869_15760 | Not Available | Positive | 3773091 - 3773771 | 26405.8 |
| hypothetical protein | DW869_15765 | Not Available | Negative | 3773721 - 3773876 | 6327.86 |
| recombinase family protein | DW869_15770 | Not Available | Negative | 3774140 - 3774784 | 24337.2 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

