Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_15660 | Not Available | Negative | 3761848 - 3763044 | 47330.0 |
| dna-binding protein | DW869_15665 | Not Available | Negative | 3763057 - 3763404 | 13490.3 |
| winged helix-turn-helix transcriptional regulator | DW869_15670 | Not Available | Negative | 3763449 - 3764834 | 51787.9 |
| arac family transcriptional regulator | DW869_15675 | Not Available | Negative | 3764912 - 3765751 | 32916.8 |
| sugar o-acetyltransferase | DW869_15680 | Not Available | Positive | 3765862 - 3766458 | 21793.6 |
| hypothetical protein | DW869_15690 | Not Available | Negative | 3766603 - 3766920 | 12512.3 |
| hypothetical protein | DW869_15695 | Not Available | Positive | 3766992 - 3767294 | 11957.8 |
| molybdenum abc transporter atp-binding protein | DW869_15700 | Not Available | Positive | 3767477 - 3767806 | 13104.9 |
| hypothetical protein | DW869_15705 | Not Available | Positive | 3767821 - 3768081 | 10446.6 |
| hypothetical protein | DW869_15710 | Not Available | Negative | 3768075 - 3768347 | 10616.7 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

