Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna cytosine methyltransferase | DW869_01415 | Not Available | Negative | 360327 - 360989 | 25493.9 |
| hypothetical protein | DW869_01420 | Not Available | Negative | 361007 - 361285 | 10798.1 |
| hypothetical protein | DW869_01425 | Not Available | Negative | 361408 - 361959 | 21145.9 |
| hypothetical protein | DW869_01430 | Not Available | Negative | 361971 - 362270 | 11600.4 |
| xre family transcriptional regulator | DW869_01435 | Not Available | Positive | 362317 - 362622 | 11359.0 |
| hypothetical protein | DW869_01440 | Not Available | Positive | 362668 - 362889 | 8234.2 |
| hypothetical protein | DW869_01445 | Not Available | Positive | 362855 - 362977 | 4346.13 |
| hypothetical protein | DW869_01450 | Not Available | Positive | 362922 - 363125 | 7568.29 |
| hypothetical protein | DW869_01455 | Not Available | Positive | 363119 - 363433 | 11221.4 |
| transporter | DW869_01460 | Not Available | Positive | 363611 - 364960 | 50768.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

