Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| b12-binding domain-containing radical sam protein | DW869_15455 | Not Available | Negative | 3718611 - 3720248 | 62730.8 |
| n-acetyltransferase | DW869_15460 | Not Available | Negative | 3720264 - 3720785 | 20094.9 |
| gnat family n-acetyltransferase | DW869_15465 | Not Available | Negative | 3720803 - 3721234 | 16235.8 |
| n-acetyltransferase | DW869_15470 | Not Available | Positive | 3721339 - 3721824 | 18784.7 |
| duf488 family protein | DW869_15475 | Not Available | Positive | 3721898 - 3722254 | 14232.9 |
| acetyl-coa carboxylase biotin carboxylase subunit | DW869_15480 | Not Available | Positive | 3722431 - 3723942 | 57013.6 |
| acetyl-coa carboxylase biotin carboxyl carrier protein subunit | DW869_15485 | Not Available | Positive | 3723967 - 3724482 | 19041.9 |
| acyl-coa carboxylase subunit beta | DW869_15490 | Not Available | Positive | 3724485 - 3726017 | 55925.1 |
| aminopeptidase | DW869_15495 | Not Available | Negative | 3726148 - 3727458 | 50786.5 |
| hypothetical protein | DW869_15500 | Not Available | Positive | 3727563 - 3728186 | 24607.8 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

