Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| acyltransferase | DW869_15095 | Not Available | Positive | 3630050 - 3631180 | 42281.5 |
| hypothetical protein | DW869_15100 | Not Available | Positive | 3631147 - 3631392 | 9286.4 |
| duf4906 domain-containing protein | DW869_15105 | Not Available | Negative | 3631570 - 3633924 | 88187.2 |
| hypothetical protein | DW869_15110 | Not Available | Negative | 3633950 - 3635104 | 42257.6 |
| fimbrillin family protein | DW869_15115 | Not Available | Negative | 3635139 - 3636113 | 34106.6 |
| fimbrillin family protein | DW869_15120 | Not Available | Negative | 3636253 - 3637281 | 37959.6 |
| duf5119 domain-containing protein | DW869_15125 | Not Available | Negative | 3637340 - 3638368 | 38324.4 |
| duf3575 domain-containing protein | DW869_15130 | Not Available | Negative | 3638365 - 3639615 | 47973.7 |
| invertase | DW869_15135 | Not Available | Negative | 3639938 - 3640597 | 25155.2 |
| hypothetical protein | DW869_15140 | Not Available | Positive | 3640721 - 3641056 | 12596.5 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

