Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_15045 | Not Available | Positive | 3621490 - 3621726 | 9216.02 |
| qace family quaternary ammonium compound efflux smr transporter | DW869_15050 | Not Available | Negative | 3621827 - 3622159 | 11850.1 |
| recombinase family protein | DW869_15055 | Not Available | Negative | 3622495 - 3623142 | 24289.3 |
| hypothetical protein | DW869_15060 | Not Available | Positive | 3623377 - 3624426 | 39232.9 |
| hypothetical protein | DW869_15065 | Not Available | Positive | 3624453 - 3624905 | 17350.9 |
| hypothetical protein | DW869_15070 | Not Available | Positive | 3624940 - 3625314 | 14373.4 |
| hypothetical protein | DW869_15075 | Not Available | Positive | 3625311 - 3625901 | 23063.3 |
| marr family transcriptional regulator | DW869_15080 | Not Available | Positive | 3625891 - 3626733 | 31636.4 |
| recombinase | DW869_15085 | Not Available | Positive | 3626956 - 3628413 | 55354.9 |
| hypothetical protein | DW869_15090 | Not Available | Positive | 3628466 - 3629872 | 52207.9 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

