Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fructan hydrolase | DW869_14995 | Not Available | Positive | 3614702 - 3614917 | 8388.06 |
| hypothetical protein | DW869_15000 | Not Available | Negative | 3615267 - 3615461 | 7202.75 |
| single-stranded dna-binding protein | DW869_15005 | Not Available | Positive | 3615675 - 3616058 | 14379.1 |
| hypothetical protein | DW869_15010 | Not Available | Positive | 3616439 - 3616966 | 20778.0 |
| hypothetical protein | DW869_15015 | Not Available | Positive | 3617393 - 3618082 | 26783.4 |
| nitrate abc transporter permease | DW869_15020 | Not Available | Positive | 3618310 - 3618528 | 7782.63 |
| hypothetical protein | DW869_15025 | Not Available | Positive | 3618552 - 3618866 | 12695.8 |
| hypothetical protein | DW869_15030 | Not Available | Negative | 3618926 - 3619318 | 15136.8 |
| hu family dna-binding protein | DW869_15035 | Not Available | Negative | 3619416 - 3619697 | 10233.7 |
| mate family efflux transporter | DW869_15040 | Not Available | Positive | 3619915 - 3621279 | 49257.1 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

