Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | DW869_14940 | Not Available | Positive | 3609914 - 3610942 | 38913.6 |
| hypothetical protein | DW869_14945 | Not Available | Positive | 3610974 - 3611195 | 7183.72 |
| hypothetical protein | DW869_14950 | Not Available | Positive | 3611468 - 3611773 | 11963.3 |
| hypothetical protein | DW869_14960 | Not Available | Positive | 3612496 - 3612792 | 11525.4 |
| ribonuclease p | DW869_14965 | Not Available | Positive | 3612811 - 3612987 | 6637.75 |
| molybdenum abc transporter atp-binding protein | DW869_14970 | Not Available | Positive | 3613002 - 3613334 | 12983.6 |
| hypothetical protein | DW869_14975 | Not Available | Positive | 3613347 - 3613643 | 11473.9 |
| hypothetical protein | DW869_14980 | Not Available | Positive | 3613648 - 3613905 | 10359.4 |
| hypothetical protein | DW869_14985 | Not Available | Negative | 3613963 - 3614184 | 8376.32 |
| hypothetical protein | DW869_14990 | Not Available | Positive | 3614378 - 3614665 | 11430.5 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

