Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_14840 | Not Available | Positive | 3587001 - 3587237 | 8867.62 |
| s9 family peptidase | DW869_14845 | Not Available | Positive | 3587270 - 3589984 | 102691.0 |
| duf177 domain-containing protein | DW869_14850 | Not Available | Positive | 3590536 - 3591069 | 19819.5 |
| 50s ribosomal protein l32 | DW869_14855 | Not Available | Positive | 3591081 - 3591266 | 6838.3 |
| ketoacyl-acp synthase iii | DW869_14860 | Not Available | Positive | 3591371 - 3592375 | 36862.4 |
| gtpase era | DW869_14865 | Not Available | Positive | 3592458 - 3593339 | 33673.8 |
| ribosome biogenesis gtpase der | DW869_14870 | Not Available | Positive | 3593373 - 3594686 | 49388.4 |
| abc transporter atp-binding protein | DW869_14875 | Not Available | Negative | 3594765 - 3595529 | 28911.9 |
| abc transporter permease | DW869_14880 | Not Available | Negative | 3595526 - 3596269 | 27369.4 |
| lps export abc transporter atp-binding protein | DW869_14885 | Not Available | Positive | 3596398 - 3597219 | 31018.3 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

