Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphonoacetaldehyde hydrolase | DW869_14790 | Not Available | Negative | 3571870 - 3572658 | 29135.4 |
| hypothetical protein | DW869_14795 | Not Available | Negative | 3572701 - 3574059 | 51118.7 |
| hypothetical protein | DW869_14800 | Not Available | Positive | 3574306 - 3575184 | 33621.2 |
| helicase | DW869_14805 | Not Available | Negative | 3575564 - 3577621 | 79334.9 |
| atp-binding protein | DW869_14810 | Not Available | Negative | 3577939 - 3581592 | 144573.0 |
| hypothetical protein | DW869_14815 | Not Available | Negative | 3581576 - 3582157 | 23365.4 |
| hypothetical protein | DW869_14820 | Not Available | Negative | 3582163 - 3583386 | 48463.2 |
| iron-containing alcohol dehydrogenase | DW869_14825 | Not Available | Negative | 3583687 - 3584862 | 43343.4 |
| formate--tetrahydrofolate ligase | DW869_14830 | Not Available | Positive | 3584951 - 3586618 | 60542.1 |
| hypothetical protein | DW869_14835 | Not Available | Negative | 3586650 - 3586877 | 8214.64 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

