Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase f0 subunit c | DW869_14740 | Not Available | Positive | 3561518 - 3561772 | 8151.6 |
| atp synthase subunit b | DW869_14745 | Not Available | Positive | 3561783 - 3562283 | 18885.0 |
| f0f1 atp synthase subunit delta | DW869_14750 | Not Available | Positive | 3562289 - 3562846 | 21019.8 |
| atp synthase subunit alpha | DW869_14755 | Not Available | Positive | 3562968 - 3564560 | 57717.7 |
| atp synthase subunit gamma | DW869_14760 | Not Available | Positive | 3564563 - 3565432 | 32458.6 |
| class i sam-dependent methyltransferase | DW869_14765 | Not Available | Negative | 3565520 - 3566254 | 27883.3 |
| atpase | DW869_14770 | Not Available | Positive | 3566505 - 3568127 | 62386.6 |
| vwa domain-containing protein | DW869_14775 | Not Available | Positive | 3568099 - 3569412 | 51605.9 |
| porin | DW869_14780 | Not Available | Positive | 3569556 - 3570707 | 43038.9 |
| 2-aminoethylphosphonate--pyruvate transaminase | DW869_14785 | Not Available | Negative | 3570775 - 3571863 | 40693.9 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

