Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_14690 | Not Available | Positive | 3550627 - 3551064 | 16855.3 |
| udp-2,3-diacylglucosamine diphosphatase | DW869_14695 | Not Available | Positive | 3551241 - 3552044 | 31136.1 |
| glycosyltransferase | DW869_14700 | Not Available | Positive | 3552041 - 3553168 | 43509.6 |
| rna degradosome polyphosphate kinase | DW869_14705 | Not Available | Positive | 3553304 - 3555370 | 79791.8 |
| ppx/gppa family phosphatase | DW869_14710 | Not Available | Positive | 3555372 - 3556286 | 34342.0 |
| peptidase m28 | DW869_14715 | Not Available | Positive | 3556429 - 3557976 | 57370.0 |
| atp synthase subunit beta | DW869_14720 | Not Available | Positive | 3558172 - 3559707 | 56123.4 |
| hypothetical protein | DW869_14725 | Not Available | Positive | 3559716 - 3559970 | 9226.99 |
| hypothetical protein | DW869_14730 | Not Available | Positive | 3559980 - 3560393 | 16367.0 |
| atp synthase f0 subunit a | DW869_14735 | Not Available | Positive | 3560395 - 3561486 | 40577.2 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

