Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_14640 | Not Available | Negative | 3538553 - 3539020 | 18222.9 |
| mobilization protein | DW869_14645 | Not Available | Negative | 3539167 - 3539625 | 18105.8 |
| glycoside hydrolase family 95 protein | DW869_14650 | Not Available | Positive | 3539645 - 3542104 | 91888.4 |
| iron-sulfur cluster repair di-iron protein | DW869_14655 | Not Available | Negative | 3542184 - 3542915 | 27895.2 |
| hydroxylamine reductase | DW869_14660 | Not Available | Negative | 3542927 - 3544585 | 61176.4 |
| crp/fnr family transcriptional regulator | DW869_14665 | Not Available | Positive | 3544700 - 3545290 | 21991.1 |
| arylsulfatase | DW869_14670 | Not Available | Negative | 3545575 - 3547122 | 56930.6 |
| hypothetical protein | DW869_14675 | Not Available | Positive | 3547601 - 3548338 | 27845.7 |
| dna-binding response regulator | DW869_14680 | Not Available | Positive | 3548559 - 3549236 | 25927.3 |
| sensor histidine kinase | DW869_14685 | Not Available | Positive | 3549237 - 3550523 | 49706.0 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

