Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent helicase | DW869_14590 | Not Available | Positive | 3529828 - 3532206 | 90909.6 |
| gtp-binding protein | DW869_14595 | Not Available | Negative | 3532320 - 3532922 | 23034.9 |
| sodium:solute symporter | DW869_14600 | Not Available | Negative | 3532888 - 3534369 | 55351.7 |
| recombination protein recr | DW869_14605 | Not Available | Positive | 3534448 - 3535065 | 22458.3 |
| hypothetical protein | DW869_14610 | Not Available | Positive | 3535086 - 3535556 | 17754.4 |
| n-acetyltransferase | DW869_14615 | Not Available | Positive | 3535553 - 3536089 | 20476.6 |
| yqge/algh family protein | DW869_14620 | Not Available | Negative | 3536082 - 3536672 | 22412.9 |
| hypothetical protein | DW869_14625 | Not Available | Positive | 3536728 - 3536925 | 7902.13 |
| Trna-asp | Not Available | Not Available | Positive | 3536903 - 3536976 | Not Available |
| energy transducer tonb | DW869_14635 | Not Available | Negative | 3537138 - 3538523 | 52016.3 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

