Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_14215 | Not Available | Negative | 3433865 - 3434086 | 8825.62 |
| glycosyltransferase family 1 protein | DW869_14220 | Not Available | Negative | 3434129 - 3435259 | 43854.1 |
| hypothetical protein | DW869_14225 | Not Available | Negative | 3435263 - 3436312 | 41158.2 |
| glycosyltransferase | DW869_14230 | Not Available | Negative | 3436309 - 3437217 | 35719.3 |
| glycosyltransferase family 2 protein | DW869_14240 | Not Available | Negative | 3438382 - 3439305 | 35725.0 |
| glycosyl hydrolase | DW869_14245 | Not Available | Negative | 3439312 - 3440406 | 43985.5 |
| glycosyltransferase family 1 protein | DW869_14250 | Not Available | Negative | 3440522 - 3441754 | 47291.6 |
| polysaccharide pyruvyl transferase family protein | DW869_14255 | Not Available | Negative | 3441775 - 3442905 | 44120.0 |
| 4fe-4s ferredoxin | DW869_14260 | Not Available | Negative | 3442905 - 3444119 | 46593.3 |
| lipopolysaccharide biosynthesis protein | DW869_14265 | Not Available | Negative | 3444116 - 3445651 | 57443.1 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

