Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii toxin-antitoxin system hica family toxin | DW869_01260 | Not Available | Negative | 336680 - 336862 | 6839.3 |
| hypothetical protein | DW869_01265 | Not Available | Negative | 337003 - 337413 | 15807.1 |
| hypothetical protein | DW869_01270 | Not Available | Negative | 337594 - 338040 | 16866.5 |
| lysozyme | DW869_01275 | Not Available | Negative | 338037 - 338471 | 16002.4 |
| hypothetical protein | DW869_01280 | Not Available | Negative | 338468 - 339280 | 30916.2 |
| hypothetical protein | DW869_01285 | Not Available | Negative | 339290 - 340240 | 35834.1 |
| hypothetical protein | DW869_01290 | Not Available | Negative | 340224 - 340925 | 27359.2 |
| hypothetical protein | DW869_01295 | Not Available | Negative | 340918 - 342282 | 51478.0 |
| hypothetical protein | DW869_01300 | Not Available | Negative | 342287 - 342565 | 10638.0 |
| hypothetical protein | DW869_01305 | Not Available | Negative | 342642 - 343067 | 16254.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

