Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_13905 | Not Available | Negative | 3359361 - 3360251 | 33870.1 |
| atp-binding cassette domain-containing protein | DW869_13910 | Not Available | Negative | 3360266 - 3361108 | 31463.2 |
| tetratricopeptide repeat protein | DW869_13915 | Not Available | Negative | 3361294 - 3362709 | 53344.0 |
| phosphate abc transporter substrate-binding protein | DW869_13920 | Not Available | Negative | 3362733 - 3363674 | 34242.5 |
| energy transducer tonb | DW869_13925 | Not Available | Negative | 3363687 - 3364499 | 30376.9 |
| biopolymer transporter exbd | DW869_13930 | Not Available | Negative | 3364529 - 3365179 | 24262.1 |
| biopolymer transporter exbd | DW869_13935 | Not Available | Negative | 3365192 - 3365797 | 22770.7 |
| mota/tolq/exbb proton channel family protein | DW869_13940 | Not Available | Negative | 3365826 - 3366641 | 28947.5 |
| hypothetical protein | DW869_13945 | Not Available | Negative | 3366748 - 3367152 | 15275.8 |
| hypothetical protein | DW869_13950 | Not Available | Positive | 3367373 - 3367563 | 7696.44 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

