Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | DW869_13330 | Not Available | Positive | 3233999 - 3234508 | 19446.2 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | DW869_13335 | Not Available | Positive | 3234517 - 3235554 | 37449.5 |
| adenosylcobinamide-gdp ribazoletransferase | DW869_13340 | Not Available | Positive | 3235557 - 3236306 | 27738.7 |
| alpha-ribazole phosphatase | DW869_13345 | Not Available | Positive | 3236300 - 3236830 | 20124.8 |
| duf1622 domain-containing protein | DW869_13350 | Not Available | Positive | 3236882 - 3237223 | 12539.8 |
| hypothetical protein | DW869_13365 | Not Available | Negative | 3238358 - 3238609 | 9377.15 |
| hypothetical protein | DW869_13370 | Not Available | Positive | 3239016 - 3239768 | 26808.6 |
| hypothetical protein | DW869_13380 | Not Available | Positive | 3240564 - 3240869 | 10751.8 |
| hypothetical protein | DW869_13385 | Not Available | Positive | 3241859 - 3243112 | 48826.7 |
| Trna-gly | Not Available | Not Available | Positive | 3243730 - 3243805 | Not Available |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

