Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional folylpolyglutamate synthase/dihydrofolate synthase | DW869_13075 | Not Available | Positive | 3173075 - 3174361 | 48045.6 |
| galactose mutarotase | DW869_13080 | Not Available | Positive | 3174456 - 3175550 | 39986.6 |
| mfs transporter | DW869_13085 | Not Available | Positive | 3175597 - 3176937 | 47498.5 |
| galactokinase | DW869_13090 | Not Available | Positive | 3176978 - 3178132 | 42994.0 |
| galactose mutarotase | DW869_13095 | Not Available | Positive | 3178329 - 3179483 | 41993.6 |
| sss family transporter | DW869_13100 | Not Available | Positive | 3179510 - 3181252 | 64455.8 |
| nudix hydrolase | DW869_13105 | Not Available | Positive | 3181328 - 3182005 | 26233.5 |
| l-ribulose-5-phosphate 4-epimerase | DW869_13110 | Not Available | Positive | 3182076 - 3182762 | 24994.8 |
| l-arabinose isomerase | DW869_13115 | Not Available | Positive | 3182802 - 3184331 | 57229.3 |
| atpase | DW869_13120 | Not Available | Positive | 3184434 - 3186035 | 57903.2 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

