Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | DW869_12975 | Not Available | Negative | 3153027 - 3154277 | 48071.8 |
| abc transporter permease | DW869_12980 | Not Available | Negative | 3154309 - 3155601 | 47604.7 |
| abc transporter atp-binding protein | DW869_12985 | Not Available | Negative | 3155645 - 3156310 | 24550.0 |
| abc transporter permease | DW869_12990 | Not Available | Negative | 3156429 - 3157709 | 49292.9 |
| abc transporter permease | DW869_12995 | Not Available | Negative | 3157725 - 3159026 | 49433.1 |
| hlyd family efflux transporter periplasmic adaptor subunit | DW869_13000 | Not Available | Negative | 3159153 - 3160400 | 46534.9 |
| lysm peptidoglycan-binding domain-containing protein | DW869_13005 | Not Available | Negative | 3160562 - 3161458 | 35105.5 |
| hypothetical protein | DW869_13010 | Not Available | Negative | 3161564 - 3162205 | 24576.1 |
| hypothetical protein | DW869_13015 | Not Available | Negative | 3162361 - 3162909 | 21482.5 |
| hypothetical protein | DW869_13020 | Not Available | Negative | 3162931 - 3163293 | 13705.4 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

