Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| inorganic phosphate transporter | DW869_01155 | Not Available | Positive | 303441 - 304454 | 36114.1 |
| hypothetical protein | DW869_01160 | Not Available | Positive | 304593 - 304955 | 13832.0 |
| tonb-dependent receptor | DW869_01165 | Not Available | Positive | 305004 - 307163 | 82018.8 |
| duf4625 domain-containing protein | DW869_01170 | Not Available | Positive | 307160 - 307648 | 17879.0 |
| o-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase | DW869_01175 | Not Available | Positive | 307916 - 309202 | 46224.8 |
| l-lactate permease | DW869_01180 | Not Available | Positive | 309464 - 310963 | 53058.6 |
| histone h1 | DW869_01185 | Not Available | Positive | 311133 - 311306 | 6352.79 |
| duf5113 domain-containing protein | DW869_01190 | Not Available | Positive | 311455 - 315852 | 168965.0 |
| dna-binding response regulator | DW869_01195 | Not Available | Positive | 315882 - 316610 | 27616.5 |
| transporter | DW869_01200 | Not Available | Positive | 316600 - 317316 | 26912.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

