Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyltransferase | DW869_12865 | Not Available | Negative | 3127994 - 3129082 | 41262.2 |
| radical sam protein | DW869_12870 | Not Available | Negative | 3129261 - 3130331 | 40855.5 |
| hypothetical protein | DW869_12875 | Not Available | Negative | 3130355 - 3130861 | 19791.3 |
| glycosyltransferase | DW869_12880 | Not Available | Negative | 3131102 - 3132280 | 45168.0 |
| glycosyltransferase | DW869_12885 | Not Available | Negative | 3132333 - 3133421 | 41866.4 |
| hypothetical protein | DW869_12890 | Not Available | Negative | 3133428 - 3134618 | 46313.1 |
| glycosyltransferase | DW869_12895 | Not Available | Negative | 3134618 - 3135784 | 45689.5 |
| glycosyltransferase family 1 protein | DW869_12900 | Not Available | Negative | 3135797 - 3136918 | 43580.2 |
| hypothetical protein | DW869_12905 | Not Available | Negative | 3136940 - 3137653 | 27767.9 |
| hypothetical protein | DW869_12915 | Not Available | Negative | 3139106 - 3139483 | 14509.7 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

