Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | DW869_12400 | Not Available | Negative | 3027395 - 3028804 | 54177.8 |
| adenine nucleotide alpha hydrolase family protein | DW869_12405 | Not Available | Positive | 3028948 - 3029703 | 29155.8 |
| hypothetical protein | DW869_12410 | Not Available | Negative | 3030397 - 3030618 | 8511.09 |
| hypothetical protein | DW869_12415 | Not Available | Negative | 3031543 - 3031821 | 10801.4 |
| hypothetical protein | DW869_12420 | Not Available | Positive | 3031776 - 3032150 | 14330.9 |
| duf4858 domain-containing protein | DW869_12425 | Not Available | Negative | 3032097 - 3032867 | 29514.5 |
| bifunctional dihydroorotate dehydrogenase b nad binding subunit/nadph-dependent glutamate synthase | DW869_12430 | Not Available | Negative | 3033278 - 3035575 | 82893.6 |
| mfs transporter | DW869_12435 | Not Available | Negative | 3035758 - 3036975 | 43390.6 |
| serine--trna ligase | DW869_12440 | Not Available | Negative | 3037115 - 3038389 | 47884.3 |
| nicotinamide riboside transporter pnuc | DW869_12445 | Not Available | Positive | 3038509 - 3039081 | 22144.5 |
Pathways
216 pathways
Health Effects
No health effects information available for this bacterium.

