Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Bacteroidia
Order
Bacteroidales
Family
Bacteroidaceae
Genus
Phocaeicola
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Bacteroidia |
| Order | Bacteroidales |
| Family | Bacteroidaceae |
| Genus | Phocaeicola |
| Species | Phocaeicola vulgatus |
| Strain | strain AM38-19 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Positive |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Anaerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens |
| Cell arrangement | Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1498710 bp
Thymine Count
1452742 bp
Guanine Count
1040716 bp
Cytosine Count
1113152 bp
Genome Length
5106187 bp
Protein-coding Genes
4161 genes
Non-Coding Genes
82 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sialate o-acetylesterase | DW869_01105 | Not Available | Positive | 294123 - 295547 | 53405.0 |
| hypothetical protein | DW869_01110 | Not Available | Positive | 295560 - 297791 | 85680.7 |
| linear amide c-n hydrolase | DW869_01115 | Not Available | Positive | 298005 - 299084 | 39662.6 |
| Trna-lys | Not Available | Not Available | Positive | 299256 - 299331 | Not Available |
| transposase | DW869_01125 | Not Available | Negative | 299523 - 299708 | 7160.65 |
| magnesium and cobalt transport protein cora | DW869_01130 | Not Available | Positive | 299820 - 300860 | 40193.7 |
| lrp/asnc family transcriptional regulator | DW869_01135 | Not Available | Negative | 300885 - 301355 | 17952.8 |
| hypothetical protein | DW869_01140 | Not Available | Positive | 301535 - 301960 | 15949.3 |
| deda family protein | DW869_01145 | Not Available | Positive | 302093 - 302737 | 24501.6 |
| duf47 domain-containing protein | DW869_01150 | Not Available | Positive | 302777 - 303424 | 25182.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

